The collection of about 850 items covers the period from 1782 to c. 1936, with the bulk dating to the 1780s to 1840s. The collection is divided into four series. Series I contains correspondence relating to a wide variety of topics, including French and English politics, business, trade, religious matters, and personal affairs. Many of the items are letters of introduction. There is also information on John Vaughan's immigration to America, Joseph Priestley, vaccines and inoculation (with Jefferson's comments on the same), Vaughan's business in Philadelphia, and the American Philosophical Society. Also included in this series are 2 boxes with copies of Vaughan correspondence as well as miscellaneous notes by E. W. Madeira, gathered in the course of his research on Vaughan in the 1930s. Series II consists of three volumes. Included are two of Vaughan's commonplace books. One, entitled, "J. Vaughan's book," May 17, 1779 (47 pp., in Latin; 870/L34), includes mostly Latin notations. The other commonplace book, dated 1783 (ca. 66 pp.; B V 462.c), includes comments on several prominent Americans, such as Benjamin Rush and David Rittenhouse, as well as American society generally. The third volume is a copybook with thirty letters spanning the period 1784 to 1801 (B V462.1). Series III includes material relating to Vaughan's administration of the estate of the Philadelphia merchant Samuel Merrick, 1796-1822 (Vaughan-Merrick Papers, B V462.m; 2 boxes). Series IV consists of correspondence between Vaughan and the DuPont Co. for which he served as agent (B V462.4; photocopies of 73 letters).

Robert Maskell Patterson (1787-1854, APS 1809) was a professor of chemistry and natural philosophy at the University of Pennsylvania (1812-1828) and professor of natural philosophy at the University of Virginia (1828-1835). He was director of the U.S. Mint from 1835 to 1851. His father, Robert Patterson, was a revolutionary soldier, professor of mathematics at the University of Pennsylvania (1779-1814), and director of the U.S. Mint (1805-1824).

The correspondence is principally to Zaccheus Collins (1810-1840), with bills, receipts, and notes on Rafinesque vs. Parker; letters from Collins, L.A. Tarascon, Lewis C. Beck, John Torrey, and Charles W. Short (1817-1835); and miscellaneous correspondence and documents relating to Rafinesque vs. Parker, with an account of the Felician Society of Feliciana County, Illinois (1820). The writings are chiefly on botanical topics, and include notes and essays on Indians, Blacks, grapes and wine-making, banking, and speculation. Rafinesque's growing interest in Indian antiquities, linguistics, and history is apparent in letters after 1820. There is an account of Rafinesque's scientific travels in North America and southern Europe (1800-1832), and a bibliography. The botanical notes include descriptions of specimens collected by Lewis and Clark, Patrick Gass, and Henry Muhlenberg.

The Thomas Jefferson papers contain a large number of correspondence both to and from Jefferson, as well as various other material related to American Revolutionary War and Early Republic. Includes correspondence with Patrick Henry, Charles Willson Peale, Richard Henry Lee, Horatio Gates, David Rittenhouse, Robert Patterson

A physician, natural historian, and professor at the University of Pennsylvania, Benjamin Smith Barton (1766-1815) was one of the central figures in Philadelphia's early national scientific establishment. Having received his medical training in European universities, Barton was appointed Professor at the University of Pennsylvania in 1789, lecturing on botany, materia medica, natural history. A prolific author, he established his reputation as one of the nation's preeminent botanists through his botanical text book The Elements of Botany (1803), but his contribtions to zoology, ethnology, and medicine were equally noteworthy. Barton's monograph on the "fascinating faculty" of the rattlesnake and his efforts in historical linguistics (New Views of the Origin of the Tribes and Nations of America, 1798) were widely read, and his Philadelphia Medical and Physical Journal (1804-1809) was one of the nation's first medical journals and an important outlet for natural historical research. The Barton Papers offer a comprehensive view of the professional work of Benjamin Smith Barton from the time of his return to the United States in 1789 until his death. The collection is divided into five series: Correspondence, Subject Files, Bound Volumes, Graphic Materials, and Printing Plates. The collection includes a particularly valuable series of botanical, medical, and natural historical drawings collected by Barton for research, reference, and publication. Among the many artists represented are William Bartram, Frederick Pursh, Pierre Turpin, and Benjamin Henry Latrobe.

A product of the distinctive culture of reform in antebellum Philadelphia, William Parker Foulke was the scion of the old elite who put a conservative stamp on social change. Trained as an attorney, Foulke spent much of his adult life engaging his deep amateur interest in natural history and mental philosophy and devoting himself to a variety of civic and philanthropic causes, including the colonization of formerly enslaved persons, penal reform, and cultural institutions in his native Philadelphia. The Foulke Papers are the product of the diverse social and intellectual interests of the Philadelphia attorney and philanthropist William Parker Foulke. Consisting primarily of correspondence, notes, and essays, the collection touches on Foulke's many interests. The collection includes numerous lectures delivered by Foulke along with material on the Lancaster County Prison, New York Prison Association, and the Philadelphia Society For Alleviating the Miseries of Public Prisons; notebooks concerning prisons and prisoners, including a 1846-1852 diary, and a listing of prisoners, their race, age, crime, sentence, and observations; a diary concerning the American Colonization Society (1852); a copy of an arctic diary (1853-1854) by John Wall Wilson, in the hand of Isaac Israel Hayes, which recounts much of the journey aboard the brig Advance, commanded by Elisha Kent Kane. There is also a list of buildings (1820-1841) designed by John Haviland, and material on the American Academy of Music, Philadelphia.